RefMet Compound Details

MW structure58812 (View MW Metabolite Database details)
RefMet namesn-Glycero-3-phosphocholine
Systematic name(2R)-2,3-dihydroxypropyl 2-(trimethylammonio)ethyl phosphate
SMILESC[N+](C)(C)CCOP(=O)([O-])OC[C@@H](CO)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass257.102827 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC8H20NO6PView other entries in RefMet with this formula
InChIInChI=1S/C8H20NO6P/c1-9(2,3)4-5-14-16(12,13)15-7-8(11)6-10/h8,10-11H,4-7H2,1-3H3/t8-/m1/s1
InChIKeySUHOQUVVVLNYQR-MRVPVSSYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassOrganic acids
Main ClassOrganic phosphoric acids
Sub ClassOrganic phosphoric acids
Pubchem CID657272
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving sn-Glycero-3-phosphocholine

Rxn IDKEGG ReactionEnzyme
R01030 sn-Glycero-3-phosphocholine + H2O <=> Choline + sn-Glycerol 3-phosphatesn-Glycero-3-phosphocholine glycerophosphohydrolase
R02745 1-(1-Alkenyl)-sn-glycero-3-phosphocholine + H2O <=> Aldehyde + sn-Glycero-3-phosphocholine1-(1-alkenyl)-sn-glycero-3-phosphocholine aldehydohydrolase
R02746 1-Acyl-sn-glycero-3-phosphocholine + H2O <=> sn-Glycero-3-phosphocholine + Fatty acid1-Acyl-sn-glycero-3-phosphocholine acylhydrolase
R02747 2-Acyl-sn-glycero-3-phosphocholine + H2O <=> sn-Glycero-3-phosphocholine + Fatty acid2-Acyl-sn-glycero-3-phosphocholine acylhydrolase

Table of KEGG human pathways containing sn-Glycero-3-phosphocholine

Pathway IDHuman Pathway# of reactions
hsa00564 Glycerophospholipid metabolism 3
hsa00565 Ether lipid metabolism 1
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