RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0136028
RefMet namedCTP
Systematic name2'-deoxycytidine 5'-triphosphate
SynonymsPubChem Synonyms
Exact mass466.989606 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H16N3O13P3View other entries in RefMet with this formula
Molecular descriptors
Molfile37538 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C9H16N3O13P3/c10-7-1-2-12(9(14)11-7)8-3-5(13)6(23-8)4-22-27(18,19)25-28(20,21)24-26(15,16)17/h1-2,5-6,8,13H,3-4H2,(H,18,1
9)(H,20,21)(H2,10,11,14)(H2,15,16,17)/t5-,6+,8+/m0/s1
InChIKeyRGWHQCVHVJXOKC-SHYZEUOFSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cn([C@H]2C[C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O2)O)c(=O)nc1N
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine dNTP
Distribution of dCTP in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting dCTP
External Links
Pubchem CID65091
ChEBI ID16311
KEGG IDC00458
HMDB IDHMDB0000998
Chemspider ID58601
MetaCyc IDDCTP
Spectral data for dCTP standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving dCTP

Rxn IDKEGG ReactionEnzyme
R01668 dCTP + H2O <=> dCMP + DiphosphatedCTP nucleotidohydrolase
R02326 ATP + dCDP <=> ADP + dCTPATP:dCDP phosphotransferase

Table of KEGG human pathways containing dCTP

Pathway IDHuman Pathway# of reactions
hsa00240 Pyrimidine metabolism 2
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