RefMet Compound Details

MW structure37189 (View MW Metabolite Database details)
RefMet nameUDP
Systematic name[({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
SMILESc1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)O)O2)O)O)c(=O)[nH]c1=O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass404.002204 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H14N2O12P2View other entries in RefMet with this formula
InChIKeyXCCTYIAWTASOJW-XVFCMESISA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassNucleic acids
Main ClassPyrimidines
Sub ClassPyrimidine rNDP
Pubchem CID6031
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving UDP

Rxn IDKEGG ReactionEnzyme
R00155 UDP + H2O <=> UMP + OrthophosphateUDP phosphohydrolase
R00159 UTP + H2O <=> UDP + OrthophosphateUTP phosphohydrolase
R00156 ATP + UDP <=> ADP + UTPATP:UDP phosphotransferase
R00158 ATP + UMP <=> ADP + UDPATP:UMP phosphotransferase
R02018 dUDP + Thioredoxin disulfide + H2O <=> Thioredoxin + UDP2'-Deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase

Table of KEGG human pathways containing UDP

Pathway IDHuman Pathway# of reactions
hsa00240 Pyrimidine metabolism 5