RefMet Compound Details

RefMet IDRM0135299
MW structure27999 (View MW Metabolite Database details)
RefMet nameIsopentenyl-diphosphate   Species distribution   Sample source distribution
Systematic name3-methylbut-3-enyl pyrophosphate
SMILESC=C(C)CCOP(=O)(O)OP(=O)(O)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass246.005831 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC5H12O7P2View other entries in RefMet with this formula
InChIInChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)
InChIKeyNUHSROFQTUXZQQ-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassPrenol Lipids
Main ClassIsoprenoids
Sub ClassC5 isoprenoids
Pubchem CID1195
ChEBI ID16584
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Isopentenyl-diphosphate

Rxn IDKEGG ReactionEnzyme
R01121 ATP + (R)-5-Diphosphomevalonate <=> ADP + Orthophosphate + Isopentenyl diphosphate + CO2ATP:(R)-5-diphosphomevalonate carboxy-lyase (adding ATP
R01123 Isopentenyl diphosphate <=> Dimethylallyl diphosphateIsopentenyl-diphosphate delta3-delta2-isomerase

Table of KEGG human pathways containing Isopentenyl-diphosphate

Pathway IDHuman Pathway# of reactions
hsa00900 Terpenoid backbone biosynthesis 5
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