RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0139337
RefMet nameAdenosylcobalamin
Systematic name(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-methanidyl-tetrahydrofuran-3,4-diol;cobalt;[(2R,3S,4R,5S)-5-(5,6-dimethylbenzimidazol-1-yl)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yl] [(1R)-1-methyl-2-[3-[(1R,2R,3R,4Z,7S,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-amino-2-oxo-ethyl)-7,12,17-tris(3-amino-3-oxo-propyl)-3,5,8,8,13,15,18,19-octamethyl-2,7,12,17-tetrahydro-1H-corrin-21-id-3-yl]propanoylamino]ethyl] phosphate
SynonymsPubChem Synonyms
Exact mass1579.666173 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC72H101CoN18O17PView other entries in RefMet with this formula
Molecular descriptors
Molfile121148 (Download molfile/View MW Metabolite Database details)
InChI
InChIKeyOAJLVMGLJZXSGX-OUCXYWSSSA-MView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCc1cc2c(cc1C)n(cn2)[C@@H]1[C@@H]([C@@H]([C@@H](CO)O1)OP(=O)(O)O[C@H](C)CNC(=O)CC[C@]1(C)[C@@H](CC(=O)N)[C@@H]2[C@@]3(C)[C@@](C)(CC(=O)N)[C@H](CCC(=O)N)C(=N3)/C(=C\3/[C@@](C)(CC(=O)N)[C@H](CCC(=O)N)C(=N3)/C=C\3/C(C)(C)[C@H](CCC(=O)N)C(=N3)/C(=C/1\[N-]2)/C)/C)O.[CH2-][C@@H]1[C@H]([C@H]([C@H](n2cnc3c(N)ncnc23)O1)O)O.[Co+3]
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganoheterocyclic compounds
Main ClassTetrapyrroles
Sub ClassCobalamins
Distribution of Adenosylcobalamin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Adenosylcobalamin
External Links
Pubchem CID70678541
ChEBI ID18408
KEGG IDC00194
HMDB IDHMDB0002086
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Adenosylcobalamin

Rxn IDKEGG ReactionEnzyme
R01492 ATP + Cob(I)alamin <=> Triphosphate + Cobamide coenzymeATP:cob(I)alamin Co-beta-adenosyltransferase

Table of KEGG human pathways containing Adenosylcobalamin

Pathway IDHuman Pathway# of reactions
hsa00860 Porphyrin and chlorophyll metabolism 1
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