RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0030079
RefMet name7,8-Dihydroneopterin
Systematic name2-amino-6-[(1S,2R)-1,2,3-trihydroxypropyl]-7,8-dihydropteridin-4(3H)-one
SynonymsPubChem Synonyms
Exact mass255.096754 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC9H13N5O4View other entries in RefMet with this formula
Molecular descriptors
Molfile50734 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C9H13N5O4/c10-9-13-7-5(8(18)14-9)12-3(1-11-7)6(17)4(16)2-15/h4,6,15-17H,1-2H2,(H4,10,11,13,14,18)/t4-,6+/m1/s1
InChIKeyYQIFAMYNGGOTFB-XINAWCOVSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC1C(=Nc2c(N1)nc(N)[nH]c2=O)[C@@H]([C@@H](CO)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganoheterocyclic compounds
Main ClassPterins
Sub ClassPterins
Distribution of 7,8-Dihydroneopterin in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting 7,8-Dihydroneopterin
External Links
Pubchem CID135398602
ChEBI ID17001
KEGG IDC04874
HMDB IDHMDB0002275
MetaCyc IDDIHYDRO-NEO-PTERIN
NPAtlas DBNP000530
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 7,8-Dihydroneopterin

Rxn IDKEGG ReactionEnzyme
R04620 7,8-Dihydroneopterin 3'-triphosphate + 3 H2O <=> 7,8-Dihydroneopterin + 3 Orthophosphate7,8-dihydroneopterin-3'-triphosphate phosphohydrolase (alkaline optimum)

Table of KEGG human pathways containing 7,8-Dihydroneopterin

Pathway IDHuman Pathway# of reactions
hsa00790 Folate biosynthesis 1
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