RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0042327
RefMet name5-Hydroxyindoleacetaldehyde
Systematic name2-(5-hydroxy-1H-indol-3-yl)acetaldehyde
SynonymsPubChem Synonyms
Exact mass175.063329 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC10H9NO2View other entries in RefMet with this formula
Molecular descriptors
Molfile38455 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C10H9NO2/c12-4-3-7-6-11-10-2-1-8(13)5-9(7)10/h1-2,4-6,11,13H,3H2
InChIKeyOBFAPCIUSYHFIE-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1cc2c(cc1O)c(CC=O)c[nH]2
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassAlkaloids
Main ClassTryptophan alkaloids
Sub ClassSimple indole alkaloids
Distribution of 5-Hydroxyindoleacetaldehyde in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting 5-Hydroxyindoleacetaldehyde
External Links
Pubchem CID74688
ChEBI ID50157
KEGG IDC05634
HMDB IDHMDB0004073
Chemspider ID67261
MetaCyc ID5-HYDROXYINDOLE_ACETALDEHYDE
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving 5-Hydroxyindoleacetaldehyde

Rxn IDKEGG ReactionEnzyme
R02908 Serotonin + H2O + Oxygen <=> 5-Hydroxyindoleacetaldehyde + Ammonia + Hydrogen peroxide5-Hydroxytryptamine:oxygen oxidoreductase(deaminating)(flavin-containing)
R04903 5-Hydroxyindoleacetaldehyde + NAD+ + H2O <=> 5-Hydroxyindoleacetate + H+ + NADH5-Hydroxyindoleacetaldehyde:NAD+ oxidoreductase
R04904 5-Hydroxyindoleacetaldehyde + Oxygen + H2O <=> 5-Hydroxyindoleacetate + Hydrogen peroxide5-hydroxyindoleacetaldehyde:oxygen oxidoreductase

Table of KEGG human pathways containing 5-Hydroxyindoleacetaldehyde

Pathway IDHuman Pathway# of reactions
hsa00380 Tryptophan metabolism 3
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