Summary of Study ST002789

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001738. The data can be accessed directly via it's Project DOI: 10.21228/M82719 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST002789
Study TitleMetabolomic analysis of particulate matter in the NPSG during a 2017 cruise on the R/V Kilo Moana as part of the MESOSCOPE program
Study SummaryTargeted and untargeted analysis of metabolomics samples from the North Pacific Subtropical Gyre taken during the 2017 June/July SCOPE cruise on the R/V Kilo Moana (KM1709) across a mesoscale eddy dipole, with high-resolution depth profile sampling across the DCM in the center of each eddy. Particulate matter was collected on 0.2um filters and extracted using a modified Bligh & Dyer before analysis on a QE Orbitrap. Results show significant changes in the absolute quantity and relative composition of particles in the gyre between anticyclonic and cyclonic eddies.
Institute
University of Washington
DepartmentSchool of Oceanography
LaboratoryIngalls Lab
Last NameKumler
First NameWilliam
Address1501 NE Boat St, Seattle, WA 98105
Emailwkumler@uw.edu
Phone2062216732
Submit Date2023-07-19
Raw Data AvailableYes
Raw Data File Type(s)mzML
Analysis Type DetailLC-MS
Release Date2023-08-10
Release Version1
William Kumler William Kumler
https://dx.doi.org/10.21228/M82719
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Other organism; Subject species: Natural mixed marine microbial community (Factor headings shown in green)

mb_sample_id local_sample_id Sample_type Station Depth
SA299130170706_Blk_Blk0p2_1.mzMLBlank NA NA
SA299131170706_Blk_Blk0p2_2.mzMLBlank NA NA
SA299132180821_Poo_Day1and2Poo_Half5.mzMLQC Pooled NA NA
SA299133180821_Poo_Day1and2Poo_Half4.mzMLQC Pooled NA NA
SA299134180821_Poo_Day1and2Poo_Half3.mzMLQC Pooled NA NA
SA299135180821_Poo_Day1and2Poo_Half6.mzMLQC Pooled NA NA
SA299136180205_Poo_TruePoo_Full3.mzMLQC Pooled NA NA
SA299137180205_Poo_TruePoo_Half3.mzMLQC Pooled NA NA
SA299138180205_Poo_TruePoo_Half1.mzMLQC Pooled NA NA
SA299139180821_Poo_Day1and2Poo_Half2.mzMLQC Pooled NA NA
SA299140180821_Poo_Day1and2Poo_Half1.mzMLQC Pooled NA NA
SA299141180821_Poo_Day1and2Poo_Full2.mzMLQC Pooled NA NA
SA299142180821_Poo_Day1and2Poo_Full1.mzMLQC Pooled NA NA
SA299143180821_Poo_Day1and2Poo_Full3.mzMLQC Pooled NA NA
SA299144180821_Poo_Day1and2Poo_Full4.mzMLQC Pooled NA NA
SA299145180821_Poo_Day1and2Poo_Full6.mzMLQC Pooled NA NA
SA299146180821_Poo_Day1and2Poo_Full5.mzMLQC Pooled NA NA
SA299147180205_Poo_TruePoo_Full1.mzMLQC Pooled NA NA
SA299148180205_Poo_TruePoo_Half2.mzMLQC Pooled NA NA
SA299149180205_Poo_TruePoo_Full2.mzMLQC Pooled NA NA
SA299150180821_Smp_MS10C2DCM_A.mzMLSample 10 DCM
SA299151180821_Smp_MS10C2DCM_B.mzMLSample 10 DCM
SA299152180821_Smp_MS10C2DCM_C.mzMLSample 10 DCM
SA299153180821_Smp_MS10C2175m_B.mzMLSample 10 Deep
SA299154180821_Smp_MS10C2175m_C.mzMLSample 10 Deep
SA299155180821_Smp_MS10C2175m_A.mzMLSample 10 Deep
SA299156180821_Smp_MS10C215m_C.mzMLSample 10 Surface
SA299157180821_Smp_MS10C215m_B.mzMLSample 10 Surface
SA299158180821_Smp_MS10C215m_A.mzMLSample 10 Surface
SA299159180821_Smp_MS11C2DCM_A.mzMLSample 11 DCM
SA299160180821_Smp_MS11C2DCM_C.mzMLSample 11 DCM
SA299161180821_Smp_MS11C2DCM_B.mzMLSample 11 DCM
SA299162180821_Smp_MS11C2175m_B.mzMLSample 11 Deep
SA299163180821_Smp_MS11C2175m_C.mzMLSample 11 Deep
SA299164180821_Smp_MS11C2175m_A.mzMLSample 11 Deep
SA299165180821_Smp_MS11C215m_C.mzMLSample 11 Surface
SA299166180821_Smp_MS11C215m_A.mzMLSample 11 Surface
SA299167180821_Smp_MS11C215m_B.mzMLSample 11 Surface
SA299168180821_Smp_MS12C1DCM_A.mzMLSample 12 DCM
SA299169180821_Smp_MS12C1DCM_C.mzMLSample 12 DCM
SA299170180821_Smp_MS12C1DCM_B.mzMLSample 12 DCM
SA299171180821_Smp_MS12C1175m_C.mzMLSample 12 Deep
SA299172180821_Smp_MS12C1175m_B.mzMLSample 12 Deep
SA299173180821_Smp_MS12C1175m_A.mzMLSample 12 Deep
SA299174180821_Smp_MS12C115m_A.mzMLSample 12 Surface
SA299175180821_Smp_MS12C115m_C.mzMLSample 12 Surface
SA299176180821_Smp_MS12C115m_B.mzMLSample 12 Surface
SA299177180821_Smp_MS13C2DCM_C.mzMLSample 13 DCM
SA299178180821_Smp_MS13C2DCM_B.mzMLSample 13 DCM
SA299179180821_Smp_MS13C2DCM_A.mzMLSample 13 DCM
SA299180180821_Smp_MS13C2175m_B.mzMLSample 13 Deep
SA299181180821_Smp_MS13C2175m_C.mzMLSample 13 Deep
SA299182180821_Smp_MS13C2175m_A.mzMLSample 13 Deep
SA299183180821_Smp_MS13C315m_A.mzMLSample 13 Surface
SA299184180821_Smp_MS13C315m_B.mzMLSample 13 Surface
SA299185180821_Smp_MS13C315m_C.mzMLSample 13 Surface
SA299186180821_Smp_MS14C2DCM_C.mzMLSample 14 DCM
SA299187180821_Smp_MS14C2DCM_B.mzMLSample 14 DCM
SA299188180821_Smp_MS14C2DCM_A.mzMLSample 14 DCM
SA299189180821_Smp_MS14C2175m_C.mzMLSample 14 Deep
SA299190180821_Smp_MS14C2175m_A.mzMLSample 14 Deep
SA299191180821_Smp_MS14C2175m_B.mzMLSample 14 Deep
SA299192180821_Smp_MS14C215m_A.mzMLSample 14 Surface
SA299193180821_Smp_MS14C215m_C.mzMLSample 14 Surface
SA299194180821_Smp_MS14C215m_B.mzMLSample 14 Surface
SA299195180821_Smp_MS4C1DCM_B.mzMLSample 4 DCM
SA299196180821_Smp_MS4C1DCM_A.mzMLSample 4 DCM
SA299197180821_Smp_MS4C1DCM_C.mzMLSample 4 DCM
SA299198180821_Smp_MS4C1175m_C.mzMLSample 4 Deep
SA299199180821_Smp_MS4C1175m_B.mzMLSample 4 Deep
SA299200180821_Smp_MS4C1175m_A.mzMLSample 4 Deep
SA299201180821_Smp_MS4C115m_A.mzMLSample 4 Surface
SA299202180821_Smp_MS4C115m_B.mzMLSample 4 Surface
SA299203180821_Smp_MS4C115m_C.mzMLSample 4 Surface
SA299204180821_Smp_MS5C1DCM_A.mzMLSample 5 DCM
SA299205180821_Smp_MS5C1DCM_B.mzMLSample 5 DCM
SA299206180821_Smp_MS5C1DCM_C.mzMLSample 5 DCM
SA299207180821_Smp_MS5C1175m_A.mzMLSample 5 Deep
SA299208180821_Smp_MS5C1175m_B.mzMLSample 5 Deep
SA299209180821_Smp_MS5C1175m_C.mzMLSample 5 Deep
SA299210180821_Smp_MS5C115m_C.mzMLSample 5 Surface
SA299211180821_Smp_MS5C115m_B.mzMLSample 5 Surface
SA299212180821_Smp_MS5C115m_A.mzMLSample 5 Surface
SA299213180821_Smp_MS6C3DCM_A.mzMLSample 6 DCM
SA299214180821_Smp_MS6C3DCM_C.mzMLSample 6 DCM
SA299215180821_Smp_MS6C3DCM_B.mzMLSample 6 DCM
SA299216180821_Smp_MS6C3175m_A.mzMLSample 6 Deep
SA299217180821_Smp_MS6C3175m_C.mzMLSample 6 Deep
SA299218180821_Smp_MS6C3175m_B.mzMLSample 6 Deep
SA299219180821_Smp_MS6C315m_C.mzMLSample 6 Surface
SA299220180821_Smp_MS6C315m_A.mzMLSample 6 Surface
SA299221180821_Smp_MS6C315m_B.mzMLSample 6 Surface
SA299222180821_Smp_MS7C1DCM_C.mzMLSample 7 DCM
SA299223180821_Smp_MS7C1DCM_B.mzMLSample 7 DCM
SA299224180821_Smp_MS7C1DCM_A.mzMLSample 7 DCM
SA299225180821_Smp_MS7C1175m_C.mzMLSample 7 Deep
SA299226180821_Smp_MS7C1175m_B.mzMLSample 7 Deep
SA299227180821_Smp_MS7C1175m_A.mzMLSample 7 Deep
SA299228180821_Smp_MS7C115m_A.mzMLSample 7 Surface
SA299229180821_Smp_MS7C115m_B.mzMLSample 7 Surface
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