Summary of Study ST001414

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000970. The data can be accessed directly via it's Project DOI: 10.21228/M89Q4F This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

Show all samples  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST001414
Study TitlePseudomonas aeruginosa cystic fibrosis clinical isolates volatile metabolomics
Study TypeUntargeted metabolomics
Study SummaryUntargeted metabolomics analysis of in vitro headspace volatiles from 81 Pseudomonas aeruginosa bacterial isolates from individuals with cystic fibrosis. Headspace volatiles were collected using solid-phase microextraction (SPME) (in triplicate) and comprehensive two-dimensional gas chromatography and time-of-flight mass spectrometry (GCxGC-TOFMS). 15 replicates of un-inoculated media were prepared and analyzed in parallel, for a total of 258 samples.
Institute
Arizona State University
DepartmentSchool of Life Sciences
LaboratoryBean Laboratory
Last NameDavis
First NameTrenton
Address427 E Tyler Mall, LSE 317, Tempe, AZ, 85287
EmailTrenton.J.Davis@asu.edu
Phone5738235718
Submit Date2020-05-31
Raw Data AvailableYes
Raw Data File Type(s)smp
Analysis Type DetailGC-MS
Release Date2020-09-22
Release Version1
Trenton Davis Trenton Davis
https://dx.doi.org/10.21228/M89Q4F
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Bacteria; Subject species: Pseudomonas aeruginosa (Factor headings shown in green)

mb_sample_id local_sample_id treatment
SA11598847-2 1 9_11_1bacteria
SA11598947-1 3 10_6_1bacteria
SA11599047-2 2 9_13_1bacteria
SA11599147-3 1 9_10_1bacteria
SA11599247-3 2 9_13_1bacteria
SA11599347-1 2 10_5__1bacteria
SA11599447-2 3 9_16_1bacteria
SA11599541-3 3 9_16_1bacteria
SA11599641-2 2 10_5__1bacteria
SA11599741-2 1 10_1_1bacteria
SA11599841-2 3 10_6_1bacteria
SA11599941-3 1 9_11_1bacteria
SA11600047-3 3 9_16_1bacteria
SA11600141-3 2 9_13_1bacteria
SA11600247-1 1 10_1_1bacteria
SA11600360-1 1 9_11_1bacteria
SA11600462-1 1 10_1_1bacteria
SA11600560-3 3 9_16_1bacteria
SA11600662-1 2 10_5_1bacteria
SA11600762-1 3 10_6_1bacteria
SA11600862-2 2 10_5_1bacteria
SA11600962-2 1 10_1_1bacteria
SA11601060-3 2 9_13_1bacteria
SA11601160-3 1 9_11_1bacteria
SA11601260-1 3 9_16_1bacteria
SA11601360-1 2 9_13_1bacteria
SA11601460-2 1 10_1_1bacteria
SA11601560-2 2 10_5_1bacteria
SA11601660-2 3 10_6_1bacteria
SA11601741-1 3 9_16_1bacteria
SA11601841-1 2 9_13_1bacteria
SA11601931-2 3 9_16_1bacteria
SA11602031-2 2 9_13_1bacteria
SA11602133-1 1 9_26_1bacteria
SA11602233-1 2 10_1_1bacteria
SA11602333-2 1 9_10_1bacteria
SA11602433-1 3 10_2_1bacteria
SA116025100-1 1 9_11_1bacteria
SA11602631-1 3 10_1_1bacteria
SA11602723-9 2 9_30__1bacteria
SA11602823-9 1 9_24_1bacteria
SA11602923-9 3 9_29_1bacteria
SA11603031-1 1 9_11_1bacteria
SA11603131-1 2 9_13_1bacteria
SA11603233-2 2 9_13_1bacteria
SA11603333-2 3 9_16_1bacteria
SA11603436-2 3 10_6_1bacteria
SA11603536-2 2 10_5_1bacteria
SA11603636-3 1 9_10_1bacteria
SA11603736-3 2 9_11_1bacteria
SA11603841-1 1 9_10_1bacteria
SA11603936-3 3 9_16_1bacteria
SA11604036-2 1 10_1_1bacteria
SA11604136-1 3 9_16_1bacteria
SA11604233-3 2 9_13_1bacteria
SA11604333-3 1 9_11_1bacteria
SA11604433-3 3 9_16_1bacteria
SA11604536-1 1 9_10_1bacteria
SA11604636-1 2 9_13_1bacteria
SA11604762-2 3 10_6_1bacteria
SA11604862-3 2 10_5__1bacteria
SA11604975-1 2 9_13_1bacteria
SA11605075-1 1 9_10_1bacteria
SA11605175-1 3 9_17_1bacteria
SA11605275-2 1 9_10_1bacteria
SA11605375-2 3 9_17_1bacteria
SA11605475-2 2 9_13_1bacteria
SA11605574-3 3 9_17_1bacteria
SA11605674-3 2 9_13_1bacteria
SA11605774-1 3 9_17_1bacteria
SA11605874-1 2 9_11_1bacteria
SA11605974-2 1 9_10_1bacteria
SA11606074-2 2 9_13_1bacteria
SA11606174-3 1 9_11_1bacteria
SA11606274-2 3 9_17_1bacteria
SA11606375-3 1 9_11_1bacteria
SA11606475-3 2 9_13_1bacteria
SA11606576-2 2 10_5__1bacteria
SA11606676-2 1 10_1_1bacteria
SA11606776-2 3 10_6_1bacteria
SA11606876-3 1 9_10_1bacteria
SA11606976-3 3 9_17_1bacteria
SA11607076-3 2 9_16_1bacteria
SA11607176-1 3 9_17_1bacteria
SA11607276-1 2 9_16_1bacteria
SA11607375-4 1 10_1_1bacteria
SA11607475-3 3 9_17_1bacteria
SA11607575-4 2 10_5_1bacteria
SA11607675-4 3 10_6_1bacteria
SA11607776-1 1 9_11_1bacteria
SA11607874-1 1 9_10_1bacteria
SA11607973-3 3 10_6_1bacteria
SA11608066-3 1 9_11_1bacteria
SA11608166-2 3 9_16_1bacteria
SA11608266-3 2 9_13_1bacteria
SA11608366-3 3 9_16_1bacteria
SA11608471-1 2 9_11_1bacteria
SA11608571-1 1 9_10_1bacteria
SA11608666-2 2 9_13_1bacteria
SA11608766-2 1 9_11_1bacteria
Showing page 1 of 3     Results:    1  2  3  Next     Showing results 1 to 100 of 258
  logo