Summary of Study ST002321
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001487. The data can be accessed directly via it's Project DOI: 10.21228/M8HM7D This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST002321 |
Study Title | 13C NMR metabolomics: integrating J-resolved STOCSY and INADEQUATE |
Study Summary | Robust annotation of metabolites remains a challenging task in metabolomics. This study introduces an approach that uses 13C homonuclear J-resolved experiment (JRES), statistical total correlation spectroscopy (STOCSY), and 2D incredible natural abundance double-quantum experiment (INADEQUATE) complementarily, to obtain robust molecular structure information based on 13C NMR with less experiment time. This approach was tested using the endometabolome from a model marine phytoplankton strain, varying the settings of incubation temperature, nutrient condition, and the presence of co-culturing bacteria. |
Institute | University of Georgia |
Last Name | Uchimiya |
First Name | Mario |
Address | 315 Riverbend Rd, Athens, GA, 30602, USA |
mario.uchimiya@uga.edu | |
Phone | (706) 542-8387 |
Submit Date | 2022-10-17 |
Raw Data Available | Yes |
Raw Data File Type(s) | ser |
Analysis Type Detail | NMR |
Release Date | 2022-11-25 |
Release Version | 1 |
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Collection:
Collection ID: | CO002400 |
Collection Summary: | 320 mL of diatom cells were collected by filtering the culture onto 2.0-µm-pore-size PCTE membrane filters (MilliporeSigma Isopore). Filters were kept in 50 mL tubes (Falcon) and stored at -80oC until processing. |
Collection Protocol Filename: | 2_Collection protocol__UGA_phytoplankton_Oct2022.docx |
Sample Type: | Algae |